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Enzymatic Synthesis of Chimeric DNA Oligonucleotides by in Vitro Transcription with dTTP, dCTP, dATP, and 2'-Fluoro Modified dGTP.
Authors: Kapustina, Žana and Jasponė, Aistė and Dubovskaja, Varvara and Mackevičius, Gytis and Lubys, Arvydas
Journal: ACS synthetic biology (2021): 1625-1632

Analysis of Modified Nucleotide Aptamer Library Generated by Thermophilic DNA Polymerases.
Authors: Percze, Krisztina and Mészáros, Tamás
Journal: Chembiochem : a European journal of chemical biology (2020): 2939-2944

HDACi mediate UNG2 depletion, dysregulated genomic uracil and altered expression of oncoproteins and tumor suppressors in B- and T-cell lines.
Authors: Iveland, Tobias S and Hagen, Lars and Sharma, Animesh and Sousa, Mirta M L and Sarno, Antonio and Wollen, Kristian Lied and Liabakk, Nina Beate and Slupphaug, Geir
Journal: Journal of translational medicine (2020): 159

Polymerase synthesis of four-base DNA from two stable dimeric nucleotides.
Authors: Mohsen, Michael G and Ji, Debin and Kool, Eric T
Journal: Nucleic acids research (2019): 9495-9501

Preamplification with dUTP and Cod UNG Enables Elimination of Contaminating Amplicons.
Authors: Andersson, Daniel and Svec, David and Pedersen, Cathrine and Henriksen, Jørn Remi and Ståhlberg, Anders
Journal: International journal of molecular sciences (2018)

Point of sampling detection of Zika virus within a multiplexed kit capable of detecting dengue and chikungunya.
Authors: Yaren, Ozlem and Alto, Barry W and Gangodkar, Priyanka V and Ranade, Shatakshi R and Patil, Kunal N and Bradley, Kevin M and Yang, Zunyi and Phadke, Nikhil and Benner, Steven A
Journal: BMC infectious diseases (2017): 293

Minimizing carry-over PCR contamination in expanded CAG/CTG repeat instability applications.
Authors: Aeschbach, Lorène and Dion, Vincent
Journal: Scientific reports (2017): 18026

Efficient enzymatic synthesis and dual-colour fluorescent labelling of DNA probes using long chain azido-dUTP and BCN dyes.
Authors: Ren, Xiaomei and El-Sagheer, Afaf H and Brown, Tom
Journal: Nucleic acids research (2016): e79

Post-synthesis DNA modifications using a trans-cyclooctene click handle.
Authors: Wang, Ke and Wang, Danzhu and Ji, Kaili and Chen, Weixuan and Zheng, Yueqin and Dai, Chaofeng and Wang, Binghe
Journal: Organic & biomolecular chemistry (2015): 909-15

Molecular identification of Anisakis and Hysterothylacium larvae in marine fishes from the East China Sea and the Pacific coast of central Japan.
Authors: Kong, Qingming and Fan, Lanfen and Zhang, Junhe and Akao, Nobuaki and Dong, Kewei and Lou, Di and Ding, Jianzu and Tong, Qunbo and Zheng, Bin and Chen, Rui and Ohta, Nobuo and Lu, Shaohong
Journal: International journal of food microbiology (2015): 1-7

Azide and trans-cyclooctene dUTPs: incorporation into DNA probes and fluorescent click-labelling.
Authors: Ren, Xiaomei and El-Sagheer, Afaf H and Brown, Tom
Journal: The Analyst (2015): 2671-8

Differential gene expression in Giardia lamblia under oxidative stress: significance in eukaryotic evolution.
Authors: Raj, Dibyendu and Ghosh, Esha and Mukherjee, Avik K and Nozaki, Tomoyoshi and Ganguly, Sandipan
Journal: Gene (2014): 131-9

Transcriptome analysis of Capsicum annuum varieties Mandarin and Blackcluster: assembly, annotation and molecular marker discovery.
Authors: Ahn, Yul-Kyun and Tripathi, Swati and Kim, Jeong-Ho and Cho, Young-Il and Lee, Hye-Eun and Kim, Do-Sun and Woo, Jong-Gyu and Cho, Myeong-Cheoul
Journal: Gene (2014): 494-9

[A simple error-prone PCR method through dATP reduction].
Authors: Gao, Yiping and Zhao, He and Lv, Mengyu and Sun, Guozhong and Yang, Xueju and Wang, Haibo
Journal: Wei sheng wu xue bao = Acta microbiologica Sinica (2014): 97-103

Occurrence of anisakid nematode larvae in chub mackerel (Scomber japonicus) caught off Korea.
Authors: Bak, Tae-Jong and Jeon, Chan-Hyeok and Kim, Jeong-Ho
Journal: International journal of food microbiology (2014): 149-56

Blockade by phosphorothioate aptamers of advanced glycation end products-induced damage in cultured pericytes and endothelial cells.
Authors: Higashimoto, Yuichiro and Matsui, Takanori and Nishino, Yuri and Taira, Junichi and Inoue, Hiroyoshi and Takeuchi, Masayoshi and Yamagishi, Sho-Ichi
Journal: Microvascular research (2013): 64-70

Nucleotide exchange and excision technology DNA shuffling and directed evolution.
Authors: Speck, Janina and Stebel, Sabine C and Arndt, Katja M and Müller, Kristian M
Journal: Methods in molecular biology (Clifton, N.J.) (2011): 333-44

Effect of transition metal ions on the fluorescence and Taq-catalyzed polymerase chain reaction of tricyclic cytidine analogs.
Authors: Stengel, Gudrun and Purse, Byron W and Kuchta, Robert D
Journal: Analytical biochemistry (2011): 53-60

Design, synthesis, and polymerase-catalyzed incorporation of click-modified boronic acid-TTP analogues.
Authors: Cheng, Yunfeng and Dai, Chaofeng and Peng, Hanjing and Zheng, Shilong and Jin, Shan and Wang, Binghe
Journal: Chemistry, an Asian journal (2011): 2747-52

Compartmentalized self-replication (CSR) selection of Thermococcus litoralis Sh1B DNA polymerase for diminished uracil binding.
Authors: Tubeleviciute, Agne and Skirgaila, Remigijus
Journal: Protein engineering, design & selection : PEDS (2010): 589-97

Reverse transcription of the ribonucleic acid: the first step in RT-PCR assay.
Authors: Haddad, Fadia and Baldwin, Kenneth M
Journal: Methods in molecular biology (Clifton, N.J.) (2010): 261-70

A one-step method for quantitative determination of uracil in DNA by real-time PCR.
Authors: Horváth, András and Vértessy, Beáta G
Journal: Nucleic acids research (2010): e196

3'-Protected 2'-deoxynucleoside 5'-triphosphates as a tool for heat-triggered activation of polymerase chain reaction.
Authors: Koukhareva, Inna and Lebedev, Alexandre
Journal: Analytical chemistry (2009): 4955-62

Preparation of selective and segmentally labeled single-stranded DNA for NMR by self-primed PCR and asymmetrical endonuclease double digestion.
Authors: Nelissen, Frank H T and Girard, Frederic C and Tessari, Marco and Heus, Hans A and Wijmenga, Sybren S
Journal: Nucleic acids research (2009): e114

Dihydropyrimidine dehydrogenase mRNA expression in peripheral blood of rectal cancer patients is significantly associated with residual tumor and distant metastases following resection.
Authors: Hoffmann, Andreas-Claudius and Brabender, Jan and Metzger, Ralf and Ling, Fredericke and Warnecke-Eberz, Ute and Lurje, Georg and Hoelscher, Arnulf H and Schneider, Paul M and Vallböhmer, Daniel
Journal: Journal of surgical oncology (2009): 296-301

The mutagenic properties of BrdUTP in a random mutagenesis process.
Authors: Ma, Xiangdong and Ke, Tao and Mao, Peihong and Jin, Xiang and Ma, Lixin and He, Guangyuan
Journal: Molecular biology reports (2008): 663-7

Unique substrate spectrum and PCR application of Nanoarchaeum equitans family B DNA polymerase.
Authors: Choi, Jeong Jin and Song, Jae-Geun and Nam, Ki Hoon and Lee, Jong Il and Bae, Heejin and Kim, Gun A and Sun, Younguk and Kwon, Suk-Tae
Journal: Applied and environmental microbiology (2008): 6563-9

Use of base-modified duplex-stabilizing deoxynucleoside 5'-triphosphates to enhance the hybridization properties of primers and probes in detection polymerase chain reaction.
Authors: Kutyavin, Igor V
Journal: Biochemistry (2008): 13666-73

Versatile DNA fragmentation and directed evolution with nucleotide exchange and excision technology.
Authors: Stebel, Sabine C and Arndt, Katja M and Müller, Kristian M
Journal: Methods in molecular biology (Clifton, N.J.) (2007): 167-90

Reverse transcriptases: intron-encoded proteins found in thermophilic bacteria.
Authors: Ng, Bernie and Nayak, Sunil and Gibbs, Moreland D and Lee, Jun and Bergquist, Peter L
Journal: Gene (2007): 137-44

An efficient method for the construction of functionalized DNA bearing amino acid groups through cross-coupling reactions of nucleoside triphosphates followed by primer extension or PCR.
Authors: Capek, Petr and Cahová, Hana and Pohl, Radek and Hocek, Michal and Gloeckner, Christian and Marx, Andreas
Journal: Chemistry (Weinheim an der Bergstrasse, Germany) (2007): 6196-203

Using a modified TA cloning method to create entry clones.
Authors: Chen, Qi-Jun and Zhou, Hai-Meng and Chen, Jia and Wang, Xue-Chen
Journal: Analytical biochemistry (2006): 120-5

Induction of thymidine phosphorylase expression by AZT contributes to enhancement of 5'-DFUR cytotoxicity.
Authors: Tsuneyoshi, Kengo and Haraguchi, Misako and Hongye, Zhao and Gotanda, Takenari and Tachiwada, Tokushi and Sumizawa, Tomoyuki and Furukawa, Tatsuhiko and Baba, Masanori and Akiyama, Shin-Ichi and Nakagawa, Masayuki
Journal: Cancer letters (2006): 239-46

Assessment of low linear energy transfer radiation-induced bystander mutagenesis in a three-dimensional culture model.
Authors: Persaud, Rudranath and Zhou, Hongning and Baker, Sarah E and Hei, Tom K and Hall, Eric J
Journal: Cancer research (2005): 9876-82

The use of thymidine analogs to improve the replication of an extra DNA base pair: a synthetic biological system.
Authors: Sismour, A Michael and Benner, Steven A
Journal: Nucleic acids research (2005): 5640-6

Cloning of the koi herpesvirus (KHV) gene encoding thymidine kinase and its use for a highly sensitive PCR based diagnosis.
Authors: Bercovier, Herve and Fishman, Yolanta and Nahary, Ronen and Sinai, Sharon and Zlotkin, Amir and Eyngor, Marina and Gilad, Oren and Eldar, Avi and Hedrick, Ronald P
Journal: BMC microbiology (2005): 13

Four-color multiplex reverse transcription polymerase chain reaction--overcoming its limitations.
Authors: Persson, Kent and Hamby, Keith and Ugozzoli, Luis A
Journal: Analytical biochemistry (2005): 33-42

Quantitative assessment of the effect of uracil-DNA glycosylase on amplicon DNA degradation and RNA amplification in reverse transcription-PCR.
Authors: Kleiboeker, Steven B
Journal: Virology journal (2005): 29

Nucleotide exchange and excision technology (NExT) DNA shuffling: a robust method for DNA fragmentation and directed evolution.
Authors: Müller, Kristian M and Stebel, Sabine C and Knall, Susanne and Zipf, Gregor and Bernauer, Hubert S and Arndt, Katja M
Journal: Nucleic acids research (2005): e117

Touchdown General Primer (GP5+/GP6+) PCR and optimized sample DNA concentration support the sensitive detection of human papillomavirus.
Authors: Evans, Mark F and Adamson, Christine S C and Simmons-Arnold, Linda and Cooper, Kumarasen
Journal: BMC clinical pathology (2005): 10

In vitro mutagenesis of Xanthomonas campestris alpha-amylase gene by partially replacing deoxythymidine triphosphate with 5-bromo-2'-deoxyuridine-5'-triphosphate using a PCR technique.
Authors: Ma, X D and Ke, T and Li, Y X and Huang, C X and Song, A D and Chen, H G and Wu, Y H and Jia, X C and He, G Y
Journal: Biotechnology letters (2004): 171-5

Principles of rapid polymerase chain reactions: mathematical modeling and experimental verification.
Authors: Whitney, Scott E and Sudhir, Alugupally and Nelson, R Michael and Viljoen, Hendrik J
Journal: Computational biology and chemistry (2004): 195-209

[Genetic analysis of rhodopsin and peripherin genes in patients with autosomal dominant retinitis pigmentosa (adRP) in Polish families].
Authors: Brzeziańska, Ewa and Zdzieszyńska, Małgorzata and Goś, Roman and Lewiński, Andrzej
Journal: Klinika oczna (2004): 743-8

Ultra-sensitive and specific detection of porcine endogenous retrovirus (PERV) using a sequence-capture real-time PCR approach.
Authors: Shah, Cyril A and Böni, Jürg and Bisset, Leslie R and Seebach, Jörg D and Schüpbach, Jörg
Journal: Journal of virological methods (2003): 209-16

The analogue of thymidine triphosphate containing a methylene group in place of the 5' oxygen can serve as a substrate for reverse transcriptase.
Authors: Bell, M A and Gough, G R and Gilham, P T
Journal: Nucleosides, nucleotides & nucleic acids (2003): 405-17

Two different thymidylate kinase gene homologues, including one that has catalytic activity, are encoded in the onion yellows phytoplasma genome.
Authors: Miyata, Shin-Ichi and Oshima, Kenro and Kakizawa, Shigeyuki and Nishigawa, Hisashi and Jung, Hee-Young and Kuboyama, Tsutomu and Ugaki, Masashi and Namba, Shigetou
Journal: Microbiology (Reading, England) (2003): 2243-2250

Association of the CD14 gene -159C polymorphism with progression of IgA nephropathy.
Authors: Yoon, H-J and Shin, J H and Yang, S H and Chae, D-W and Kim, H and Lee, D-S and Kim, H L and Kim, S and Lee, J S and Kim, Y S
Journal: Journal of medical genetics (2003): 104-8

[Cloning of human uracil N-glycosylase and its detection in cancer tissues by quantitative RT-PCR].
Authors: Bao, Hong-Bo and Zhang, Chuan-Bao and Wang, Jin-Fang and Zhou, Chuan-Nong and Liu, Fang and Zhao, Xiao-Hang and Qian, Shi-Jun
Journal: Sheng wu gong cheng xue bao = Chinese journal of biotechnology (2003): 561-5

Structural basis for uracil recognition by archaeal family B DNA polymerases.
Authors: Fogg, Mark J and Pearl, Laurence H and Connolly, Bernard A
Journal: Nature structural biology (2002): 922-7

[Enzymatic Preparation of Modified DNA: Study of the Kinetics by Real-Time PCR].
Authors: Lapa, S A and Pavlov, A S and Kuznetsova, V E and Shershov, V E and Spitsyn, M A and Guseinov, T O and Radko, S P and Zasedatelev, A S and Lisitsa, A V and Chudinov, A V
Journal: Molekuliarnaia biologiia : 513-523