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Open-Source Miniature Fluorimeter to Monitor Real-Time Isothermal Nucleic Acid Amplification Reactions in Resource-Limited Settings.
Authors: Coole, Jackson and Kortum, Alex and Tang, Yubo and Vohra, Imran and Maker, Yajur and Kundrod, Kathryn and Natoli, Mary and Richards-Kortum, Rebecca
Journal: Journal of visualized experiments : JoVE (2021)

Quantifying viscosity and surface tension of multicomponent protein-nucleic acid condensates.
Authors: Alshareedah, Ibraheem and Thurston, George M and Banerjee, Priya R
Journal: Biophysical journal (2021): 1161-1169

High-resolution visualization and quantification of nucleic acid-based therapeutics in cells and tissues using Nanoscale secondary ion mass spectrometry (NanoSIMS).
Authors: He, Cuiwen and Migawa, Michael T and Chen, Kai and Weston, Thomas A and Tanowitz, Michael and Song, Wenxin and Guagliardo, Paul and Iyer, K Swaminathan and Bennett, C Frank and Fong, Loren G and Seth, Punit P and Young, Stephen G and Jiang, Haibo
Journal: Nucleic acids research (2021): 1-14

Nodal metastatic load in papillary thyroid carcinoma. Morphological and molecular analysis with one-step nucleic acid amplification on more than 550 lymph nodes.
Authors: Iglesias, Carmela and González, Oscar and Temprana-Salvador, Jordi and García-Burillo, Amparo and Caubet, Enric and Ramón Y Cajal, Santiago and Zafon, Carles
Journal: Endocrinologia, diabetes y nutricion (2021): 346-353

Role of highly sensitive nucleic acid amplification testing for plasma cytomegalovirus DNA load in diagnosis of cytomegalovirus gastrointestinal disease among kidney transplant recipients.
Authors: Taksinwarajarn, Touchapong and Sobhonslidsuk, Abhasnee and Kantachuvesiri, Surasak and Thongprayoon, Charat and Cheungpasitporn, Wisit and Bruminhent, Jackrapong and ,
Journal: Transplant infectious disease : an official journal of the Transplantation Society (2021): e13635

High throughput quantification of short nucleic acid samples by capillary electrophoresis with automated data processing.
Authors: Dangerfield, Tyler L and Huang, Nathan Z and Johnson, Kenneth A
Journal: Analytical biochemistry (2021): 114239

Assessing Nucleic Acid: Cationic Nanoparticle Interaction for Gene Delivery.
Authors: Singh, Moganavelli
Journal: Methods in molecular biology (Clifton, N.J.) (2021): 43-55

Integrated microneedle-smartphone nucleic acid amplification platform for in-field diagnosis of plant diseases.
Authors: Paul, Rajesh and Ostermann, Emily and Chen, Yuting and Saville, Amanda C and Yang, Yuming and Gu, Zhen and Whitfield, Anna E and Ristaino, Jean B and Wei, Qingshan
Journal: Biosensors & bioelectronics (2021): 113312

Is DAPI assay of cellular nucleic acid reliable in the presence of protein aggregates?
Authors: Mora, Aruna K and Khan, Sufiyan and Patro, Birija S and Nath, Sukhendu
Journal: Chemical communications (Cambridge, England) (2020): 13844-13847

Rapid, Cost-Effective Peptide/Nucleic Acid-Based Platform for Therapeutic Antibody Monitoring in Clinical Samples.
Authors: Mocenigo, Marco and Porchetta, Alessandro and Rossetti, Marianna and Brass, Erik and Tonini, Lucia and Puzzi, Luca and Tagliabue, Elda and Triulzi, Tiziana and Marini, Bruna and Ricci, Francesco and Ippodrino, Rudy
Journal: ACS sensors (2020): 3109-3115

Detection of Locked Nucleic Acid Gapmers from Mouse Muscle Samples Using ELISA.
Authors: Lim, Kenji Rowel Q and Nguyen, Quynh and Yokota, Toshifumi
Journal: Methods in molecular biology (Clifton, N.J.) (2020): 233-239

Nuclear and Cytoplasmatic Quantification of Unconjugated, Label-Free Locked Nucleic Acid Oligonucleotides.
Authors: Pendergraff, Hannah and Schmidt, Steffen and Vikeså, Jonas and Weile, Christian and Øverup, Charlotte and W Lindholm, Marie and Koch, Troels
Journal: Nucleic acid therapeutics (2020): 4-13

A highly sensitive and rapid enzymatic method using a biochemical automated analyzer to detect inorganic pyrophosphate generated by nucleic acid sequence-based amplification.
Authors: Isobe, Atsushi and Iwabuchi, Yuki and Yajima, Miki and Sakasegawa, Shin-Ichi and Yamaguchi, Yoshitaka and Seimiya, Masanori and Umemura, Tsukuru and Osawa, Susumu
Journal: Clinica chimica acta; international journal of clinical chemistry (2020): 298-305

Quantification of Adeno-Associated Virus with Safe Nucleic Acid Dyes.
Authors: Xu, Jian and DeVries, Steven H and Zhu, Yongling
Journal: Human gene therapy (2020): 1086-1099

Use of human peripheral blood mononuclear cells to define immunological properties of nucleic acid nanoparticles.
Authors: Dobrovolskaia, Marina A and Afonin, Kirill A
Journal: Nature protocols (2020): 3678-3698

One-step nested RT-PCR for COVID-19 detection: A flexible, locally developed test for SARS-CoV2 nucleic acid detection.
Authors: Meza-Robles, Carmen and Barajas-Saucedo, Carlos E and Tiburcio-Jimenez, Daniel and Mokay-Ramírez, Karen A and Melnikov, Valery and Rodriguez-Sanchez, Iram P and Martinez-Fierro, Margarita L and Garza-Veloz, Idalia and Zaizar-Fregoso, Sergio A and Guzman-Esquivel, José and Ramirez-Flores, Mario and Newton-Sanchez, Oscar A and Espinoza-Gómez, Francisco and Delgado-Enciso, Osiris G and Centeno-Ramirez, Alba Sh and Delgado-Enciso, Ivan
Journal: Journal of infection in developing countries (2020): 679-684

Digital counting of nucleic acid targets using solid-state nanopores.
Authors: Beamish, Eric and Tabard-Cossa, Vincent and Godin, Michel
Journal: Nanoscale (2020): 17833-17840

A mass spectrometric platform for the quantitation of sulfur mustard-induced nucleic acid adducts as mechanistically relevant biomarkers of exposure.
Authors: Zubel, Tabea and Hochgesand, Sabrine and John, Harald and Steinritz, Dirk and Schmidt, Annette and Bürkle, Alexander and Mangerich, Aswin
Journal: Archives of toxicology (2019): 61-79

Impact of Early Antiretroviral Therapy on Detection of Cell-Associated HIV-1 Nucleic Acid in Blood by the Roche Cobas TaqMan Test.
Authors: Jagodzinski, Linda L and Manak, Mark M and Hack, Holly R and Liu, Ying and Malia, Jennifer A and Freeman, Joanna and Phanuphak, Nittaya and de Souza, Mark and Kroon, Eugène D and Colby, Donn J and Chomchey, Nitiya and Lally, Michelle A and Michael, Nelson L and Ananworanich, Jintanat and Peel, Sheila A and ,
Journal: Journal of clinical microbiology (2019)

Firefly Luciferase-Based Reporter Gene Assay for Investigating Nanoparticle-Mediated Nucleic Acid Delivery.
Authors: Müller, Katharina and Ogris, Manfred and Sami, Haider
Journal: Methods in molecular biology (Clifton, N.J.) (2019): 227-239

Prognostic value of quantitative measurement of EGFR mutation using peptide nucleic acid clamping in advanced EGFR mutant non-small cell lung cancer patients.
Authors: Kim, Insu and Eom, Jung Seop and Jo, Eun Jung and Mok Ki Uk, Jeongha and Lee, Kwangha and Uk Kim, Ki and Park, Hye-Kyung and Lee, Min Ki and Kim, Mi-Hyun
Journal: Thoracic cancer (2019): 1561-1566

A Nucleic Acid Nanostructure Built through On-Electrode Ligation for Electrochemical Detection of a Broad Range of Analytes.
Authors: Somasundaram, Subramaniam and Easley, Christopher J
Journal: Journal of the American Chemical Society (2019): 11721-11726

Evaluation of accuracy of one-step nucleic acid amplification (OSNA) in diagnosis of lymph node metastases of papillary thyroid carcinoma. Diagnostic study.
Authors: Medas, Fabio and Coni, Pierpaolo and Podda, Francesco and Salaris, Claudia and Cappellacci, Federico and Faa, Gavino and Calò, Pietro Giorgio
Journal: Annals of medicine and surgery (2012) (2019): 17-22

Macroporous Hydrogels for Stable Sequestration and Sustained Release of Vascular Endothelial Growth Factor and Basic Fibroblast Growth Factor Using Nucleic Acid Aptamers.
Authors: Abune, Lidya and Zhao, Nan and Lai, Jinping and Peterson, Benjamin and Szczesny, Spencer and Wang, Yong
Journal: ACS biomaterials science & engineering (2019): 2382-2390

Nucleic Acid Detection of Plant Genes Using CRISPR-Cas13.
Authors: Abudayyeh, Omar O and Gootenberg, Jonathan S and Kellner, Max J and Zhang, Feng
Journal: The CRISPR journal (2019): 165-171

Application of Locked Nucleic Acid Oligonucleotides for siRNA Preclinical Bioanalytics.
Authors: Thayer, Mai B and Lade, Julie M and Doherty, David and Xie, Fang and Basiri, Babak and Barnaby, Omar S and Bala, Noor S and Rock, Brooke M
Journal: Scientific reports (2019): 3566

Semi-automatic instrumentation for nucleic acid extraction and purification to quantify pathogens on surfaces.
Authors: Lee, Won-Nyoung and Yoo, Hyun Jin and Nguyen, Kim Huyen and Baek, Changyoon and Min, Junhong
Journal: The Analyst (2019): 6586-6594

Diagnosing the RGS11 Lung Cancer Biomarker: The Integration of Competitive Immunoassay and Isothermal Nucleic Acid Exponential Amplification Reaction.
Authors: Chang, Ying-Feng and Huang, Yi-Qi and Wu, Kun-Ming and Jou, Amily Fang-Ju and Shih, Neng-Yao and Ho, Ja-An Annie
Journal: Analytical chemistry (2019): 3327-3335

Synergy of Peptide-Nucleic Acid and Spherical Nucleic Acid Enabled Quantitative and Specific Detection of Tumor Exosomal MicroRNA.
Authors: Liu, Li and Lu, Hao and Shi, Ruixue and Peng, Xin-Xin and Xiang, Qingwei and Wang, Bowen and Wan, Qiang-Qiang and Sun, Yujie and Yang, Fan and Zhang, Guo-Jun
Journal: Analytical chemistry (2019): 13198-13205

Multiple liquid crystalline geometries of highly compacted nucleic acid in a dsRNA virus.
Authors: Ilca, Serban L and Sun, Xiaoyu and El Omari, Kamel and Kotecha, Abhay and de Haas, Felix and DiMaio, Frank and Grimes, Jonathan M and Stuart, David I and Poranen, Minna M and Huiskonen, Juha T
Journal: Nature (2019): 252-256

SD-chip enabled quantitative detection of HIV RNA using digital nucleic acid sequence-based amplification (dNASBA).
Authors: Wang, Jiasi and Kreutz, Jason E and Thompson, Alison M and Qin, Yuling and Sheen, Allison M and Wang, Jingang and Wu, Li and Xu, Shihan and Chang, Ming and Raugi, Dana N and Smith, Robert A and Gottlieb, Geoffrey S and Chiu, Daniel T
Journal: Lab on a chip (2018): 3501-3506

The stability of HIV-1 nucleic acid in whole blood and improved detection of HIV-1 in alternative specimen types when compared to Dried Blood Spot (DBS) specimens.
Authors: Jennings, Cheryl and Harty, Brian and Scianna, Salvatore R and Granger, Suzanne and Couzens, Amy and Zaccaro, Daniel and Bremer, James W
Journal: Journal of virological methods (2018): 91-97

Quantification of Nucleic Acid Concentration in the Nanoparticle or Polymer Conjugates Using Circular Dichroism Spectroscopy.
Authors: Peng, Zhili and Li, Jiaojiao and Li, Shanghao and Pardo, Joel and Zhou, Yiqun and Al-Youbi, Abdulrahman O and Bashammakh, Abdulaziz S and El-Shahawi, Mohammad S and Leblanc, Roger M
Journal: Analytical chemistry (2018): 2255-2262

Quantifying the Average Number of Nucleic Acid Therapeutics per Nanocarrier by Single Particle Tracking Microscopy.
Authors: Zagato, Elisa and Vermeulen, Lotte and Dewitte, Heleen and Van Imschoot, Griet and Vandenbroucke, Roosmarijn E and Demeester, Jo and De Smedt, Stefaan C and Neyts, Kristiaan and Remaut, Katrien and Braeckmans, Kevin
Journal: Molecular pharmaceutics (2018): 1142-1149

A Triple-Fluorophore-Labeled Nucleic Acid pH Nanosensor to Investigate Non-viral Gene Delivery.
Authors: Wilson, David R and Routkevitch, Denis and Rui, Yuan and Mosenia, Arman and Wahlin, Karl J and Quinones-Hinojosa, Alfredo and Zack, Donald J and Green, Jordan J
Journal: Molecular therapy : the journal of the American Society of Gene Therapy (2017): 1697-1709

Ct shift: A novel and accurate real-time PCR quantification model for direct comparison of different nucleic acid sequences and its application for transposon quantifications.
Authors: Kolacsek, Orsolya and Pergel, Enikő and Varga, Nóra and Apáti, Ágota and Orbán, Tamás I
Journal: Gene (2017): 43-49

MicroScale Thermophoresis: A Rapid and Precise Method to Quantify Protein-Nucleic Acid Interactions in Solution.
Authors: Mueller, Adrian Michael and Breitsprecher, Dennis and Duhr, Stefan and Baaske, Philipp and Schubert, Thomas and Längst, Gernot
Journal: Methods in molecular biology (Clifton, N.J.) (2017): 151-164

Availability: A Metric for Nucleic Acid Strand Displacement Systems.
Authors: Olson, Xiaoping and Kotani, Shohei and Padilla, Jennifer E and Hallstrom, Natalya and Goltry, Sara and Lee, Jeunghoon and Yurke, Bernard and Hughes, William L and Graugnard, Elton
Journal: ACS synthetic biology (2017): 84-93

Multiplexed Nucleic Acid Hybridization Assays Using Single-FRET-Pair Distance-Tuning.
Authors: Qiu, Xue and Guo, Jiajia and Jin, Zongwen and Petreto, Alexandra and Medintz, Igor L and Hildebrandt, Niko
Journal: Small (Weinheim an der Bergstrasse, Germany) (2017)

Colorimetric Nucleic Acid Detection on Paper Microchip Using Loop Mediated Isothermal Amplification and Crystal Violet Dye.
Authors: Roy, Sharmili and Mohd-Naim, Noor Faizah and Safavieh, Mohammadali and Ahmed, Minhaz Uddin
Journal: ACS sensors (2017): 1713-1720

Multiplex Peptide Nucleic Acid Fluorescence In Situ Hybridization (PNA-FISH) for Diagnosis of Bacterial Vaginosis.
Authors: Machado, Antonio and Cerca, Nuno
Journal: Methods in molecular biology (Clifton, N.J.) (2017): 209-219

A model to estimate the probability of human immunodeficiency virus and hepatitis C infection despite negative nucleic acid testing among increased-risk organ donors.
Authors: Annambhotla, Pallavi D and Gurbaxani, Brian M and Kuehnert, Matthew J and Basavaraju, Sridhar V
Journal: Transplant infectious disease : an official journal of the Transplantation Society (2017)

Observing the fate of tRNA and its modifications by nucleic acid isotope labeling mass spectrometry: NAIL-MS.
Authors: Heiss, Matthias and Reichle, Valentin F and Kellner, Stefanie
Journal: RNA biology (2017): 1260-1268

SPA-LN: a scoring function of ligand-nucleic acid interactions via optimizing both specificity and affinity.
Authors: Yan, Zhiqiang and Wang, Jin
Journal: Nucleic acids research (2017): e110

Real-time imaging of RGC death with a cell-impermeable nucleic acid dyeing compound after optic nerve crush in a murine model.
Authors: Tsuda, Satoru and Tanaka, Yuji and Kunikata, Hiroshi and Yokoyama, Yu and Yasuda, Masayuki and Ito, Azusa and Nakazawa, Toru
Journal: Experimental eye research (2016): 179-188

Visualizing nucleic acid metabolism using non-natural nucleosides and nucleotide analogs.
Authors: Choi, Jung-Suk and Berdis, Anthony J
Journal: Biochimica et biophysica acta (2016): 165-76

Nucleic acid extraction from formalin-fixed paraffin-embedded cancer cell line samples: a trade off between quantity and quality?
Authors: Seiler, Caroline and Sharpe, Alan and Barrett, J Carl and Harrington, Elizabeth A and Jones, Emma V and Marshall, Gayle B
Journal: BMC clinical pathology (2016): 17

Nucleic acid reactivity: challenges for next-generation semiempirical quantum models.
Authors: Huang, Ming and Giese, Timothy J and York, Darrin M
Journal: Journal of computational chemistry (2015): 1370-89

Integrated Microfluidic Nucleic Acid Isolation, Isothermal Amplification, and Amplicon Quantification.
Authors: Mauk, Michael G and Liu, Changchun and Song, Jinzhao and Bau, Haim H
Journal: Microarrays (Basel, Switzerland) (2015): 474-89

Quantitative nucleic acid amplification methods for viral infections.
Authors: Gullett, Jonathan C and Nolte, Frederick S
Journal: Clinical chemistry (2015): 72-8