Citation Explorer

Nile blue as reporter dye in salt aggregation based-colorimetric aptasensors for peptide, small molecule and metal ion detection.
Authors: Chovelon, Benoît and Peyrin, Eric and Ragot, Mailys and Salem, Nassim and Nguyen, Truong Giang and Auvray, Benjamin and Henry, Mickael and Petrillo, Mel-Alexandre and Fiore, Emmanuelle and Bessy, Quentin and Faure, Patrice and Ravelet, Corinne
Journal: Analytica chimica acta (2023): 340840

Near-Infrared Dye-Aptamer Assay for Small Molecule Detection in Complex Specimens.
Authors: Jin, Xin and Liu, Yingzhu and Alkhamis, Obtin and Canoura, Juan and Bacon, Adara and Xu, Ruyi and Fu, Fengfu and Xiao, Yi
Journal: Analytical chemistry (2022): 10082-10090

Detection of small molecules by fluorescence intensity using single dye labeled aptamers and quencher transition metal ions.
Authors: Billet, Blandine and Chovelon, Benoit and Fiore, Emmanuelle and Faure, Patrice and Ravelet, Corinne and Peyrin, Eric
Journal: Biosensors & bioelectronics (2022): 114091

Two-dimensional liquid chromatography coupled to mass spectrometry for impurity analysis of dye-conjugated oligonucleotides.
Authors: Koshel, Brooke and Birdsall, Robert and Chen, Weibin
Journal: Journal of chromatography. B, Analytical technologies in the biomedical and life sciences (2020): 121906

Mapping Fluorescence Enhancement of Plasmonic Nanorod Coupled Dye Molecules.
Authors: Tóth, Emese and Ungor, Ditta and Novák, Tibor and Ferenc, Györgyi and Bánhelyi, Balázs and Csapó, Edit and Erdélyi, Miklós and Csete, Mária
Journal: Nanomaterials (Basel, Switzerland) (2020)

Fluorescent dye nano-assemblies by thiol attachment directed to the tips of gold nanorods for effective emission enhancement.
Authors: Botequim, David and Silva, Inês I R and Serra, Sofia G and Melo, Eduardo P and Prazeres, Duarte M F and Costa, Sílvia M B and Paulo, Pedro M R
Journal: Nanoscale (2020): 6334-6345

Development of an oligonucleotide dye solution facilitates high throughput and cost-efficient chromosome identification in peanut.
Authors: Du, Pei and Cui, Caihong and Liu, Hua and Fu, Liuyang and Li, Lina and Dai, Xiaodong and Qin, Li and Wang, Siyu and Han, Suoyi and Xu, Jing and Liu, Bing and Huang, Bingyan and Tang, Fengshou and Dong, Wenzhao and Qi, Zengjun and Zhang, Xinyou
Journal: Plant methods (2019): 69

Initial state of DNA-Dye complex sets the stage for protein induced fluorescence modulation.
Authors: Rashid, Fahad and Raducanu, Vlad-Stefan and Zaher, Manal S and Tehseen, Muhammad and Habuchi, Satoshi and Hamdan, Samir M
Journal: Nature communications (2019): 2104

Synthesis of Dye-Modified Oligonucleotides via Copper(I)-Catalyzed Alkyne Azide Cycloaddition Using On- and Off-Bead Approaches.
Authors: Schwechheimer, Christian and Doll, Larissa and Wagenknecht, Hans-Achim
Journal: Current protocols in nucleic acid chemistry (2018): 4.80.1-4.80.13

DNA-Functionalized Dye-Loaded Polymeric Nanoparticles: Ultrabright FRET Platform for Amplified Detection of Nucleic Acids.
Authors: Melnychuk, Nina and Klymchenko, Andrey S
Journal: Journal of the American Chemical Society (2018): 10856-10865

General and facile purification of dye-labeled oligonucleotides by pH-controlled extraction.
Authors: Bak, So Young and Hwang, Jihee and Bae, Sohyeon and Lim, Soonkyu and Kim, Younggyu and Alzahrani, Khalid and Wahab, Rizwan and Alkhedhairy, Abdulaziz and Kim, Seong Keun
Journal: BioTechniques (2018): 21-23

RELIC: a novel dye-bias correction method for Illumina Methylation BeadChip.
Authors: Xu, Zongli and Langie, Sabine A S and De Boever, Patrick and Taylor, Jack A and Niu, Liang
Journal: BMC genomics (2017): 4

Design, installation, and performance evaluation of a custom dye matrix standard for automated capillary electrophoresis.
Authors: Cloete, Kevin Wesley and Ristow, Peter Gustav and Kasu, Mohaimin and D'Amato, Maria Eugenia
Journal: Electrophoresis (2017): 617-623

An Optimized Protocol for Electrophoretic Mobility Shift Assay Using Infrared Fluorescent Dye-labeled Oligonucleotides.
Authors: Hsieh, Yi-Wen and Alqadah, Amel and Chuang, Chiou-Fen
Journal: Journal of visualized experiments : JoVE (2016)

An overview on the interaction of phenazinium dye phenosafranine to RNA triple and double helices.
Authors: Pradhan, Ankur Bikash and Mondal, Hasnat Karim and Haque, Lucy and Bhuiya, Sutanwi and Das, Suman
Journal: International journal of biological macromolecules (2016): 345-51

Synthesis and properties of peptide nucleic acid labeled at the N-terminus with HiLyte Fluor 488 fluorescent dye.
Authors: Hnedzko, Dziyana and McGee, Dennis W and Rozners, Eriks
Journal: Bioorganic & medicinal chemistry (2016): 4199-4205

1-Phenylethynylpyrene (PEPy) as a novel blue-emitting dye for qPCR assay.
Authors: Aparin, Ilya O and Farzan, Valentina M and Veselova, Olga A and Chistov, Alexey A and Podkolzin, Alexander T and Ustinov, Alexey V and Shipulin, German A and Formanovsky, Andrey A and Korshun, Vladimir A and Zatsepin, Timofei S
Journal: The Analyst (2016): 1331-8

DNA-Dye-Conjugates: Conformations and Spectra of Fluorescence Probes.
Authors: Beierlein, Frank R and Paradas Palomo, Miguel and Sharapa, Dmitry I and Zozulia, Oleksii and Mokhir, Andriy and Clark, Timothy
Journal: PloS one (2016): e0160229

Oligonucleotide-capped mesoporous silica nanoparticles as DNA-responsive dye delivery systems for genomic DNA detection.
Authors: Pascual, Lluís and Baroja, Isabel and Aznar, Elena and Sancenón, Félix and Marcos, M Dolores and Murguía, Jose Ramón and Amorós, Pedro and Rurack, Knut and Martínez-Máñez, Ramón
Journal: Chemical communications (Cambridge, England) (2015): 1414-6

Highly sensitive fluorescence quantitative detection of specific DNA sequences with molecular beacons and nucleic acid dye SYBR Green I.
Authors: Xiang, Dongshan and Zhai, Kun and Xiang, Wenjun and Wang, Lianzhi
Journal: Talanta (2014): 249-53

Sub-diffusion decays in fluorescence correlation spectroscopy: dye photophysics or protein dynamics?
Authors: Mazouchi, Amir and Bahram, Abdullah and Gradinaru, Claudiu C
Journal: The journal of physical chemistry. B (2013): 11100-11

A universal and label-free aptasensor for fluorescent detection of ATP and thrombin based on SYBR Green I dye.
Authors: Kong, Ling and Xu, Jin and Xu, Yunying and Xiang, Yun and Yuan, Ruo and Chai, Yaqin
Journal: Biosensors & bioelectronics (2013): 193-7

Use of the SYBR Green dye for measuring helicase activity.
Authors: Siddiqui, Sammer and Khan, Irfan and Zarina, Shamshad and Ali, Syed
Journal: Enzyme and microbial technology (2013): 196-8

Structures of an apo and a binary complex of an evolved archeal B family DNA polymerase capable of synthesising highly cy-dye labelled DNA.
Authors: Wynne, Samantha A and Pinheiro, Vitor B and Holliger, Philipp and Leslie, Andrew G W
Journal: PloS one (2013): e70892

A label-free signal amplification assay for DNA detection based on exonuclease III and nucleic acid dye SYBR Green I.
Authors: Zheng, Aihua and Luo, Ming and Xiang, Dongshan and Xiang, Xia and Ji, Xinghu and He, Zhike
Journal: Talanta (2013): 49-53

Dye-doped silica nanoparticle with HIV-1 TAT peptide for bioimaging.
Authors: Choi, Jin-Ha and Kang, So-Ra and Kim, Heesuk and Um, Soong Ho and Shin, Kwanwoo and Choi, Jeong-Woo and Oh, Byung-Keun
Journal: Journal of biomedical nanotechnology (2013): 291-4

Probing quenched dye fluorescence of Cy3-DNA-Au-nanoparticle hybrid conjugates using solution and array platforms.
Authors: Obliosca, Judy M and Wang, Pen-Cheng and Tseng, Fan-Gang
Journal: Journal of colloid and interface science (2012): 34-41

Enhanced azo dye wastewater treatment in a two-stage anaerobic system with Fe0 dosing.
Authors: Liu, Yiwen and Zhang, Yaobin and Zhao, Zhiqiang and Li, Yang and Quan, Xie and Chen, Shuo
Journal: Bioresource technology (2012): 148-53

Dual color fluorescence quantitative detection of specific single-stranded DNA with molecular beacons and nucleic acid dye SYBR Green I.
Authors: Xiang, Dong-Shan and Zhou, Guo-Hua and Luo, Ming and Ji, Xing-Hu and He, Zhi-Ke
Journal: The Analyst (2012): 3787-93

Tricolour fluorescence detection of sequence-specific DNA with a new molecular beacon and a nucleic acid dye TOTO-3.
Authors: Xiang, Dongshan and Zhang, Cuiling and Chen, Lu and Ji, Xinghu and He, Zhike
Journal: The Analyst (2012): 5898-905

Direct visualization of dye and oligonucleotide diffusion in silica filaments with collinear mesopores.
Authors: Feil, Florian and Cauda, Valentina and Bein, Thomas and Bräuchle, Christoph
Journal: Nano letters (2012): 1354-61

Sensing of transcription factor binding via cyanine dye pair fluorescence lifetime changes.
Authors: Bogdanov, Alexei A and Metelev, Valeriy and Zhang, Surong and Kumar, Anand T N
Journal: Molecular bioSystems (2012): 2166-73

Fluorescent dye-doped silica nanoparticles: new tools for bioapplications.
Authors: Bae, Se Won and Tan, Weihong and Hong, Jong-In
Journal: Chemical communications (Cambridge, England) (2012): 2270-82

Fluorescence resonance energy transfer dye-labeled probe for fluorescence-enhanced DNA detection: an effective strategy to greatly improve discrimination ability toward single-base mismatch.
Authors: Li, Hailong and Luo, Yonglan and Sun, Xuping
Journal: Biosensors & bioelectronics (2011): 167-71

Postsynthetic modification of oligonucleotides with imidazophenazine dye and its effect on duplex stability.
Authors: Dubey, Larysa and Ryazanova, Olga and Zozulya, Victor and Fedoryak, Dmytro and Dubey, Igor
Journal: Nucleosides, nucleotides & nucleic acids (2011): 585-96

A DNA hybridization detection based on fluorescence resonance energy transfer between dye-doped core-shell silica nanoparticles and gold nanoparticles.
Authors: Gao, Feng and Cui, Peng and Chen, Xiaoxiao and Ye, Qingqing and Li, Maoguo and Wang, Lun
Journal: The Analyst (2011): 3973-80

Development of highly fluorescent silica nanoparticles chemically doped with organic dye for sensitive DNA microarray detection.
Authors: Liu, Aihua and Wu, Liyou and He, Zhili and Zhou, Jizhong
Journal: Analytical and bioanalytical chemistry (2011): 2003-11

Signal enhancement in DNA microarray using dye doped silica nanoparticles: application to human papilloma virus (HPV) detection.
Authors: Riccò, Raffaele and Meneghello, Anna and Enrichi, Francesco
Journal: Biosensors & bioelectronics (2011): 2761-5

An STR melt curve genotyping assay for forensic analysis employing an intercalating dye probe FRET.
Authors: Halpern, Micah D and Ballantyne, Jack
Journal: Journal of forensic sciences (2011): 36-45

Oxazine dye-conjugated dna oligonucleotides: Förster resonance energy transfer in view of molecular dye-DNA interactions.
Authors: Kupstat, Annette and Ritschel, Thomas and Kumke, Michael U
Journal: Bioconjugate chemistry (2011): 2546-57

Fluorescence dye adsorption assay to quantify carboxyl groups on the surface of poly(methyl methacrylate) microbeads.
Authors: Rödiger, Stefan and Ruhland, Mirko and Schmidt, Carsten and Schröder, Christian and Grossmann, Kai and Böhm, Alexander and Nitschke, Jörg and Berger, Ingo and Schimke, Ingolf and Schierack, Peter
Journal: Analytical chemistry (2011): 3379-85

Photophysical properties of Atto655 dye in the presence of guanosine and tryptophan in aqueous solution.
Authors: Zhu, Ruixue and Li, Xun and Zhao, Xin Sheng and Yu, Anchi
Journal: The journal of physical chemistry. B (2011): 5001-7

Dye/DNA conjugates as multiple labels for antibodies in sensitive fluorescence immunoassays.
Authors: Zhang, Qin and Zhu, Shengchao and Guo, Liang-Hong
Journal: Methods in molecular biology (Clifton, N.J.) (2011): 43-54

Native and fluorescent dye-dependent single-DNA molecule microchip dynamics as measured by differential interference contrast microscopy.
Authors: Oh, Doori and Lee, Seungah and Kang, Seong Ho
Journal: Chemical communications (Cambridge, England) (2011): 9137-9

Azide-alkyne "click" conjugation of 8-aza-7-deazaadenine-DNA: synthesis, duplex stability, and fluorogenic dye labeling.
Authors: Seela, Frank and Pujari, Suresh S
Journal: Bioconjugate chemistry (2010): 1629-41

The DNA relaxation activity and covalent complex accumulation of Mycobacterium tuberculosis topoisomerase I can be assayed in Escherichia coli: application for identification of potential FRET-dye labeling sites.
Authors: Narula, Gagandeep and Becker, Jennifer and Cheng, Bokun and Dani, Neil and Abrenica, Maria V and Tse-Dinh, Yuk-Ching
Journal: BMC biochemistry (2010): 41

Quantitative detection of single molecules using enhancement of Dye/DNA conjugate-labeled nanoparticles.
Authors: Xue, Qingwang and Jiang, Dafeng and Wang, Lei and Jiang, Wei
Journal: Bioconjugate chemistry (2010): 1987-93

Photophysics and binding constant determination of the homodimeric dye BOBO-3 and DNA oligonucleotides.
Authors: Ruedas-Rama, Maria J and Orte, Angel and Crovetto, Luis and Talavera, Eva M and Alvarez-Pez, Jose M
Journal: The journal of physical chemistry. B (2010): 1094-103

Binding of BOBO-3 intercalative dye to DNA homo-oligonucleotides with different base compositions.
Authors: Ruedas-Rama, Maria J and Alvarez-Pez, Jose M and Paredes, Jose M and Talavera, Eva M and Orte, Angel
Journal: The journal of physical chemistry. B (2010): 6713-21

Development and characterization of oligonucleotide-tagged dye-encapsulating EPC/DPPG liposomes.
Authors: Mourelatou, Elena A and Spyratou, Ellas and Georgopoulos, Aristidis and Makropoulou, Mersini and Liandris, Emmanouil and Gazouli, Maria and Ikonomopoulos, John and Demetzos, Costas
Journal: Journal of nanoscience and nanotechnology (2010): 5548-56