Citation Explorer

In Situ Membrane Biotinylation Enables the Direct Labeling and Accurate Kinetic Analysis of Small Extracellular Vesicles in Circulation.
Authors: Yu, Zi-Li and Zhao, Yi and Miao, Fan and Wu, Min and Xia, Hou-Fu and Chen, Zhuo-Kun and Liu, Hai-Ming and Zhao, Yi-Fang and Chen, Gang
Journal: Analytical chemistry (2021): 10862-10870

Tris(hydroxymethyl)aminomethane Compatibility with N-Hydroxysuccinimide Ester Chemistry: Biotinylation of Peptides and Proteins in TRIS Buffer.
Authors: Kratzer, Ulrich and Sommersdorf, Cornelia and Maier, Sandra and Wagner, Teresa R and Templin, Markus and Joos, Thomas O and Rothbauer, Ulrich and Zeck, Anne and Poetz, Oliver
Journal: Bioconjugate chemistry (2021)

A Toolbox for Efficient Proximity-Dependent Biotinylation in Zebrafish Embryos.
Authors: Rosenthal, Shimon M and Misra, Tvisha and Abdouni, Hala and Branon, Tess C and Ting, Alice Y and Scott, Ian C and Gingras, Anne-Claude
Journal: Molecular & cellular proteomics : MCP (2021): 100128

In vivo discovery of RNA proximal proteins via proximity-dependent biotinylation.
Authors: Lin, Xianzhi and Fonseca, Marcos A S and Breunig, Joshua J and Corona, Rosario I and Lawrenson, Kate
Journal: RNA biology (2021): 1-15

Kinase-Catalyzed Biotinylation to Map Cell Signaling Pathways: Application to Epidermal Growth Factor Signaling.
Authors: Ramanayake-Mudiyanselage, Vindya and Embogama, D Maheeka and Pflum, Mary Kay H
Journal: Journal of proteome research (2021)

A proximity-dependent biotinylation map of a human cell.
Authors: Go, Christopher D and Knight, James D R and Rajasekharan, Archita and Rathod, Bhavisha and Hesketh, Geoffrey G and Abe, Kento T and Youn, Ji-Young and Samavarchi-Tehrani, Payman and Zhang, Hui and Zhu, Lucie Y and Popiel, Evelyn and Lambert, Jean-Philippe and Coyaud, Étienne and Cheung, Sally W T and Rajendran, Dushyandi and Wong, Cassandra J and Antonicka, Hana and Pelletier, Laurence and Palazzo, Alexander F and Shoubridge, Eric A and Raught, Brian and Gingras, Anne-Claude
Journal: Nature (2021): 120-124

Directly Quantifiable Biotinylation Using a Water-Soluble Isatoic Anhydride Platform.
Authors: Fessler, Adam B and Fowler, Anthony J and Ogle, Craig A
Journal: Bioconjugate chemistry (2021): 904-908

Rapid Enzyme-Mediated Biotinylation for Cell Surface Proteome Profiling.
Authors: Li, Yanan and Wang, Yan and Yao, Yating and Lyu, Jiawen and Qiao, Qinglong and Mao, Jiawei and Xu, Zhaochao and Ye, Mingliang
Journal: Analytical chemistry (2021): 4542-4551

Autophagosome content profiling using proximity biotinylation proteomics coupled to protease digestion in mammalian cells.
Authors: Zellner, Susanne and Nalbach, Karsten and Behrends, Christian
Journal: STAR protocols (2021): 100506

4-Thiouridine-Enhanced Peroxidase-Generated Biotinylation of RNA.
Authors: Huang, Jinguo and Zhao, Ruiqi and Qin, Shanshan and Yang, Shixi and Li, Wei and Mo, Jing and Wang, Fang and Du, Yuhao and Weng, Xiaocheng and Zhou, Xiang
Journal: Chembiochem : a European journal of chemical biology (2021): 212-216

Phenoxy Radical Reactivity of Nucleic Acids: Practical Implications for Biotinylation.
Authors: Wilbanks, Brandon and Garcia, Brian and Byrne, Shane and Dedon, Peter and Maher, L James
Journal: Chembiochem : a European journal of chemical biology (2021): 1400-1404

Thiol-Cleavable Biotin for Chemical and Enzymatic Biotinylation and Its Application to Mitochondrial TurboID Proteomics.
Authors: Li, Haorong and Frankenfield, Ashley M and Houston, Ryan and Sekine, Shiori and Hao, Ling
Journal: Journal of the American Society for Mass Spectrometry (2021): 2358-2365

Proximity-Dependent Biotinylation to Elucidate the Interactome of TNK2 Nonreceptor Tyrosine Kinase.
Authors: Tahir, Raiha and Madugundu, Anil K and Udainiya, Savita and Cutler, Jevon A and Renuse, Santosh and Wang, Li and Pearson, Nicole A and Mitchell, Christopher J and Mahajan, Nupam and Pandey, Akhilesh and Wu, Xinyan
Journal: Journal of proteome research (2021): 4566-4577

Proximity-Dependent Biotinylation (BioID) of Integrin Interaction Partners.
Authors: Myllymäki, Satu-Marja and Liu, Xiaonan and Varjosalo, Markku and Manninen, Aki
Journal: Methods in molecular biology (Clifton, N.J.) (2021): 57-69

Coupling of Cell Surface Biotinylation and SILAC-Based Quantitative Proteomics Identified Myoferlin as a Potential Therapeutic Target for Nasopharyngeal Carcinoma Metastasis.
Authors: Li, Maoyu and Peng, Fang and Wang, Guoqiang and Liang, Xujun and Shao, Meiying and Chen, Zhuchu and Chen, Yongheng
Journal: Frontiers in cell and developmental biology (2021): 621810

Off-the-shelf proximity biotinylation for interaction proteomics.
Authors: Santos-Barriopedro, Irene and van Mierlo, Guido and Vermeulen, Michiel
Journal: Nature communications (2021): 5015

An Optimized Protocol for Proximity Biotinylation in Confluent Epithelial Cell Cultures Using the Peroxidase APEX2.
Authors: Tan, Benedict and Peng, Suat and Yatim, Siti Maryam J M and Gunaratne, Jayantha and Hunziker, Walter and Ludwig, Alexander
Journal: STAR protocols (2020): 100074

Comparative Application of BioID and TurboID for Protein-Proximity Biotinylation.
Authors: May, Danielle G and Scott, Kelsey L and Campos, Alexandre R and Roux, Kyle J
Journal: Cells (2020)

Biotinylation of Membrane Proteins for Binder Selections.
Authors: Kuhn, Benedikt T and Zimmermann, Iwan and Egloff, Pascal and Hürlimann, Lea M and Hutter, Cedric A J and Miscenic, Christian and Dawson, Roger J P and Seeger, Markus A and Geertsma, Eric R
Journal: Methods in molecular biology (Clifton, N.J.) (2020): 151-165

Partial proteolysis improves the identification of the extracellular segments of transmembrane proteins by surface biotinylation.
Authors: Langó, Tamás and Pataki, Zoltán Gergő and Turiák, Lilla and Ács, András and Varga, Julia Kornélia and Várady, György and Kucsma, Nóra and Drahos, László and Tusnády, Gábor E
Journal: Scientific reports (2020): 8880

Detecting Tumor Antigen-Specific T Cells via Interaction-Dependent Fucosyl-Biotinylation.
Authors: Liu, Zilei and Li, Jie P and Chen, Mingkuan and Wu, Mengyao and Shi, Yujie and Li, Wei and Teijaro, John R and Wu, Peng
Journal: Cell (2020): 1117-1133.e19

Exploring 5'-Biotinylation of the Sense Strand to Improve siRNA Specificity and Potency.
Authors: Mobergslien, Anne and Sioud, Mouldy
Journal: Methods in molecular biology (Clifton, N.J.) (2020): 163-170

Proximal Biotinylation-Based Combinatory Approach for Isolating Integral Plasma Membrane Proteins.
Authors: Akdag, Mehmet and Yunt, Zeynep Sabahat and Kamacioglu, Altug and Qureshi, Mohammed Haroon and Akarlar, Busra A and Ozlu, Nurhan
Journal: Journal of proteome research (2020): 3583-3592

In Vivo Quantitative Estimation of DNA-Dependent Interaction of Sox2 and Oct4 Using BirA-Catalyzed Site-Specific Biotinylation.
Authors: Kulyyassov, Arman and Ogryzko, Vasily
Journal: Biomolecules (2020)

AirID, a novel proximity biotinylation enzyme, for analysis of protein-protein interactions.
Authors: Kido, Kohki and Yamanaka, Satoshi and Nakano, Shogo and Motani, Kou and Shinohara, Souta and Nozawa, Akira and Kosako, Hidetaka and Ito, Sohei and Sawasaki, Tatsuya
Journal: eLife (2020)

Enzymatic RNA Biotinylation for Affinity Purification and Identification of RNA-Protein Interactions.
Authors: Busby, Kayla N and Fulzele, Amitkumar and Zhang, Dongyang and Bennett, Eric J and Devaraj, Neal K
Journal: ACS chemical biology (2020): 2247-2258

One-Step Biotinylation of Cellulose Paper by Polymer Coating to Prepare a Paper-Based Analytical Device.
Authors: Kaneko, Kazuki and Hara, Manami and Nishino, Takashi and Maruyama, Tatsuo
Journal: Analytical chemistry (2020): 1978-1987

A Novel Proximity Biotinylation Assay Based on the Self-Associating Split GFP1-10/11.
Authors: Kesari, Aditi S and Aryal, Uma K and LaCount, Douglas J
Journal: Proteomes (2020)

High specificity and tight spatial restriction of self-biotinylation by DNA and RNA G-Quadruplexes complexed in vitro and in vivo with Heme.
Authors: Lat, Prince Kumar and Liu, Kun and Kumar, Dev N and Wong, Kenneth K L and Verheyen, Esther M and Sen, Dipankar
Journal: Nucleic acids research (2020)

A multi-layered structure of the interphase chromocenter revealed by proximity-based biotinylation.
Authors: Kochanova, Natalia Y and Schauer, Tamas and Mathias, Grusha Primal and Lukacs, Andrea and Schmidt, Andreas and Flatley, Andrew and Schepers, Aloys and Thomae, Andreas W and Imhof, Axel
Journal: Nucleic acids research (2020): 4161-4178

Proximity Dependent Biotinylation: Key Enzymes and Adaptation to Proteomics Approaches.
Authors: Samavarchi-Tehrani, Payman and Samson, Reuben and Gingras, Anne-Claude
Journal: Molecular & cellular proteomics : MCP (2020): 757-773

Establishment of Proximity-Dependent Biotinylation Approaches in Different Plant Model Systems.
Authors: Arora, Deepanksha and Abel, Nikolaj B and Liu, Chen and Van Damme, Petra and Yperman, Klaas and Eeckhout, Dominique and Vu, Lam Dai and Wang, Jie and Tornkvist, Anna and Impens, Francis and Korbei, Barbara and Van Leene, Jelle and Goossens, Alain and De Jaeger, Geert and Ott, Thomas and Moschou, Panagiotis Nikolaou and Van Damme, Daniël
Journal: The Plant cell (2020): 3388-3407

Proximity biotinylation reveals novel secreted dense granule proteins of Toxoplasma gondii bradyzoites.
Authors: Nadipuram, Santhosh Mukund and Thind, Amara Cervantes and Rayatpisheh, Shima and Wohlschlegel, James Akira and Bradley, Peter John
Journal: PloS one (2020): e0232552

Variability in Streptavidin-Sepharose Matrix Quality Can Significantly Affect Proximity-Dependent Biotinylation (BioID) Data.
Authors: St-Germain, Jonathan R and Samavarchi Tehrani, Payman and Wong, Cassandra and Larsen, Brett and Gingras, Anne-Claude and Raught, Brian
Journal: Journal of proteome research (2020): 3554-3561

Insight into the Interactome of Intramitochondrial PKA Using Biotinylation-Proximity Labeling.
Authors: Ould Amer, Yasmine and Hebert-Chatelain, Etienne
Journal: International journal of molecular sciences (2020)

Studying Purinoceptor Cell-Surface Expression by Protein Biotinylation.
Authors: Young, Mark T
Journal: Methods in molecular biology (Clifton, N.J.) (2020): 137-146

The necdin interactome: evaluating the effects of amino acid substitutions and cell stress using proximity-dependent biotinylation (BioID) and mass spectrometry.
Authors: Sanderson, Matthea R and Badior, Katherine E and Fahlman, Richard P and Wevrick, Rachel
Journal: Human genetics (2020): 1513-1529

Topological features of integrin adhesion complexes revealed by multiplexed proximity biotinylation.
Authors: Chastney, Megan R and Lawless, Craig and Humphries, Jonathan D and Warwood, Stacey and Jones, Matthew C and Knight, David and Jorgensen, Claus and Humphries, Martin J
Journal: The Journal of cell biology (2020)

Multiplexed Proximity Biotinylation Coupled to Mass Spectrometry for Defining Integrin Adhesion Complexes.
Authors: Chastney, Megan R and Lawless, Craig and Humphries, Martin J
Journal: Current protocols in cell biology (2020): e113

BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING).
Authors: Motani, Kou and Kosako, Hidetaka
Journal: The Journal of biological chemistry (2020): 11174-11183

Reversible biotinylation of purified proteins for measuring protein-protein interactions.
Authors: Dwivedi-Agnihotri, Hemlata and Srivastava, Ashish and Shukla, Arun K
Journal: Methods in enzymology (2020): 281-294

Mapping axon initial segment structure and function by multiplexed proximity biotinylation.
Authors: Hamdan, Hamdan and Lim, Brian C and Torii, Tomohiro and Joshi, Abhijeet and Konning, Matthias and Smith, Cameron and Palmer, Donna J and Ng, Philip and Leterrier, Christophe and Oses-Prieto, Juan A and Burlingame, Alma L and Rasband, Matthew N
Journal: Nature communications (2020): 100

Mammalian Expression and In Situ Biotinylation of Extracellular Protein Targets for Directed Evolution.
Authors: Grindel, Brian J and Engel, Brian J and Hall, Carolyn G and Kelderhouse, Lindsay E and Lucci, Anthony and Zacharias, Niki M and Takahashi, Terry T and Millward, Steven W
Journal: ACS omega (2020): 25440-25455

Structure-Based Design with Tag-Based Purification and In-Process Biotinylation Enable Streamlined Development of SARS-CoV-2 Spike Molecular Probes.
Authors: Zhou, Tongqing and Teng, I-Ting and Olia, Adam S and Cerutti, Gabriele and Gorman, Jason and Nazzari, Alexandra and Shi, Wei and Tsybovsky, Yaroslav and Wang, Lingshu and Wang, Shuishu and Zhang, Baoshan and Zhang, Yi and Katsamba, Phinikoula S and Petrova, Yuliya and Banach, Bailey B and Fahad, Ahmed S and Liu, Lihong and Lopez Acevedo, Sheila N and Madan, Bharat and Oliveira de Souza, Matheus and Pan, Xiaoli and Wang, Pengfei and Wolfe, Jacy R and Yin, Michael and Ho, David D and Phung, Emily and DiPiazza, Anthony and Chang, Lauren A and Abiona, Olubukola M and Corbett, Kizzmekia S and DeKosky, Brandon J and Graham, Barney S and Mascola, John R and Misasi, John and Ruckwardt, Tracy and Sullivan, Nancy J and Shapiro, Lawrence and Kwong, Peter D
Journal: Cell reports (2020): 108322

The influence of biotinylation on the ability of a computer designed protein to detect B-cells producing anti-HIV-1 2F5 antibodies.
Authors: Coêlho, Danilo F and Ferraz, Matheus V F and Marques, Ernesto T A and Lins, Roberto D and Viana, Isabelle F T
Journal: Journal of molecular graphics & modelling (2019): 107442

The influence of a single and double biotinylation of xanthohumol on its anticancer activity.
Authors: Stompor, Monika and Świtalska, Marta and Wietrzyk, Joanna
Journal: Acta biochimica Polonica (2019): 559-565

Isolation of secreted proteins from Drosophila ovaries and embryos through in vivo BirA-mediated biotinylation.
Authors: Stevens, Leslie M and Zhang, Yuan and Volnov, Yuri and Chen, Geng and Stein, David S
Journal: PloS one (2019): e0219878

Improvement of the sensitivity of the detection of Gal d 6-specific IgE via biotinylation in vivo.
Authors: Huang, L and Bao, H and Li, S and Zhang, J and Li, L and Zhang, B and Yu, Y and Liu, Y and Li, H
Journal: Allergologia et immunopathologia : 348-354