AAT Bioquest offers a comprehensive selection of FMOC-Glu(Dye) building blocks designed for in-sequence labeling of glutamic acid (Glu) residues during solid-phase peptide synthesis (SPPS). These pre-labeled amino acid derivatives enable researchers to incorporate fluorescent dyes, quenchers, and biotin tags directly into peptides at specific positions, making them essential tools for developing FRET-based protease substrates, fluorescent peptide probes, and biotinylated peptides for detection and purification applications.
Fluorescent FMOC-Glu Derivatives
FMOC-Glu derivatives labeled with fluorescent donor dyes are essential components for constructing FRET-based peptide substrates. These building blocks allow site-specific incorporation of fluorophores at glutamic acid positions during standard SPPS protocols. FAM and EDANS serve as classic green-emitting and blue-emitting donors, respectively, and commonly paired with DABCYL, while TAMRA and TF3 provide orange-emitting options for red-shifted FRET pairs.
Standard SPPS Compatibility: Compatible with standard Fmoc SPPS protocols
Isomer Options: Available as single isomers (5-FAM, 5-TAMRA) or mixed isomers (5/6-FAM, 5/6-TAMRA) to suit purity requirements
TF3 Performance: TF3 provides spectral properties identical to Cy3 with improved performance
Established FRET Pairs: EDANS/DABCYL represents the most widely published FRET pair for protease substrates
Dark Quencher FMOC-Glu Derivatives
Dark quencher-labeled FMOC-Glu derivatives serve as non-fluorescent FRET acceptors in peptide substrates. When incorporated into the same peptide as a fluorescent donor, these quenchers efficiently suppress donor fluorescence until the peptide is cleaved by a protease. DABCYL is the classic quencher paired with EDANS, while Tide Quencher™ (TQ) dyes offer superior quenching efficiency across broader wavelength ranges.
TQ2 Optimization: Tide Quencher™ 2 (TQ2) provides optimal quenching for green fluorophores (FAM, fluorescein)
Classic DABCYL: Early published quencher EDANS-based FRET pairs
Background Elimination: Non-fluorescent output eliminates background interference in assays
Biotinylated FMOC-Glu Derivative
FMOC-Glu(biotinyl-PEG)-OH enables the incorporation of biotin tags at glutamic acid positions during peptide synthesis. The PEG spacer enhances water solubility and reduces steric hindrance, ensuring efficient streptavidin binding. This building block is particularly useful for creating biotinylated peptides for affinity purification, immobilization on streptavidin surfaces, or detection using streptavidin-conjugated reporters.
PEG Spacer: Provides excellent solubility in DMF and other SPPS solvents
Lysine Alternative: Serves as an alternative to FMOC-Lys(biotin)-OH when Glu positioning is preferred
Streptavidin Compatible: Compatible with standard streptavidin/avidin detection systems
This document (01.0329.251203r1) was last updated on Sat Feb 28 2026. All trademarks and registered trademarks mentioned herein are the property of their respective owners.