Psoralen-PEG3-Biotin
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Telephone | 1-800-990-8053 |
Fax | 1-800-609-2943 |
sales@aatbio.com | |
International | See distributors |
Bulk request | Inquire |
Custom size | Inquire |
Shipping | Standard overnight for United States, inquire for international |
Molecular weight | 688.79 |
Solvent | DMSO |
H-phrase | H303, H313, H333 |
Hazard symbol | XN |
Intended use | Research Use Only (RUO) |
R-phrase | R20, R21, R22 |
Storage | Freeze (< -15 °C) |
UNSPSC | 12171501 |
Overview | SDSProtocol |
Molecular weight 688.79 |
Example protocol
PREPARATION OF STOCK SOLUTIONS
Prepare a Psolaren-PEG3-Biotin stock solution by adding 70 μL (for Cat# 39050) or 350 μL (for Cat# 39051) of DMSO to the vial of Psolaren-PEG3-Biotin.
Note: Any unused stock solution should be divided into single-use aliquots and stored at ≤-20 °C after preparation. Protect from light and avoid repeated freeze-thaw cycles.
SAMPLE EXPERIMENTAL PROTOCOL
The following protocol is to be used as a general guideline and may require optimization for your specific application and experimental system.
Adjust DNA or RNA to the desired concentration (e.g., 20-100 μg/mL) in TE buffer (10 mM Tris, 1 mM EDTA, pH 7.4).
Note: To improve the binding of dye to nucleic acid, DNA can be denatured by boiling for 5 minutes. After boiling, the DNA tube should be quickly cooled by placing it in a dry ice/ethanol bath.
Add 1 μL of Psolaren-PEG3-Biotin stock solution to the DNA or RNA (100 μL volume) and mix well.
Note: A serial dilution of the Psolaren-PEG3-Biotin stock solution may be required when using small reaction volumes.
Irradiate the tube from above using a long wavelength UV light source for at least 20-30 minutes.
To remove any non-reacted Psolaren-PEG3-Biotin, precipitate the sample with 0.5 M NaCl and two volumes of 100% ethanol at -20 °C for a minimum of 30 minutes. After centrifugation, wash the pellet with 70% ethanol and allow it to dry. Dissolve the biotinylated sample in water or a buffer of your choice.
Biotinylated DNA can then be verified using HABA and gel electrophoresis.
Calculators
Common stock solution preparation
0.1 mg | 0.5 mg | 1 mg | 5 mg | 10 mg | |
1 mM | 145.182 µL | 725.911 µL | 1.452 mL | 7.259 mL | 14.518 mL |
5 mM | 29.036 µL | 145.182 µL | 290.364 µL | 1.452 mL | 2.904 mL |
10 mM | 14.518 µL | 72.591 µL | 145.182 µL | 725.911 µL | 1.452 mL |
Molarity calculator
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References
Authors: Worley, Travis K and Weber, Emma A and Acott, Jedidiah D and Shimpi, Rahul S and Cole, Jessica M and Courcelle, Charmain T and Courcelle, Justin
Journal: Journal of bacteriology (2023): e0012623
Authors: Liu, Yajun and Pei, Yufeng and Xu, Jingjing and Cheng, Yuanlei and Tong, Qingyi and You, Huijuan
Journal: Analytical chemistry (2022): 13623-13630
Authors: Sabatella, Mariangela and Pines, Alex and Slyskova, Jana and Vermeulen, Wim and Lans, Hannes
Journal: Cellular and molecular life sciences : CMLS (2020): 2005-2016
Authors: Zardoni, Luca and Nardini, Eleonora and Liberi, Giordano
Journal: Methods in molecular biology (Clifton, N.J.) (2020): 43-59
Authors: Albelazi, Mustafa S and Martin, Peter R and Mohammed, Soran and Mutti, Luciano and Parsons, Jason L and Elder, Rhoderick H
Journal: Genes (2019)
Authors: Perera, Anthonige Vidya and Mendenhall, James Brian and Courcelle, Charmain Tan and Courcelle, Justin
Journal: Journal of bacteriology (2016): 3099-3108
Authors: Fröbel, Sascha and Reiffers, Anna and Torres Ziegenbein, Christian and Gilch, Peter
Journal: The journal of physical chemistry letters (2015): 1260-4
Authors: Saffran, Wilma A and Ahmed, Anam and Binyaminov, Olga and Gonzalez, Cynthia and Gupta, Amita and Fajardo, Manuel A and Kishun, Devindra and Nandram, Ashana and Reyes, Kenneth and Scalercio, Karina and Senior, Charles W
Journal: DNA repair (2014): 87-96
Authors: Smith, Leigh A and Makarova, Alena V and Samson, Laura and Thiesen, Katherine E and Dhar, Alok and Bessho, Tadayoshi
Journal: Biochemistry (2012): 8931-8
Authors: Bermúdez, Ignacio and García-Martínez, José and Pérez-Ortín, José E and Roca, Joaquim
Journal: Nucleic acids research (2010): e182