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SNARF™-1 Carboxylic Acid, Acetate, Succinimidyl Ester

Product key features

  • Ratiometric pH Sensitivity: Enables precise pH measurement (pH 7–8) with emission shifts from 580 nm to 640 nm.
  • Stable Fluorescence: Covalent protein binding ensures long-lasting signal through multiple cell divisions with minimal leakage.
  • Multiplex Compatibility: Spectrally distinct from green probes (e.g., CFSE) for simultaneous analysis of cell subsets.
  • Low Cytotoxicity: Minimizes cellular perturbation, ideal for sensitive proliferation and migration assays.
  • Broad Instrument Use: Compatible with flow cytometry and fluorescence microscopy for high-resolution analyses.

Product description

SNARF™-1 carboxylic acid, acetate, succinimidyl ester is a pH-sensitive orange-red fluorescent probe optimized for long-term analysis of mixed-cell populations. With a pKa of ~7.5, it is ideal for detecting pH changes within the physiological range (pH 7–8). The probe exhibits a distinct pH-dependent emission shift, transitioning from yellow-orange fluorescence under acidic conditions to deep red under basic conditions. This property enables precise ratiometric pH measurements by comparing fluorescence intensities at two emission maxima, typically 580 nm and 640 nm.

SNARF™-1 carboxylic acid, acetate, SE is spectrally distinct from green-emitting probes such as CFDA SE (CFSE), facilitating multiplexed analysis of heterogeneous cell populations. Upon cellular uptake, intracellular esterases hydrolyze the acetate groups, unmasking the reactive succinimidyl ester moiety. This reactive group forms covalent bonds with intracellular proteins, generating a stable, long-lasting fluorescent signal that persists through multiple cell divisions with minimal photobleaching, leakage, or signal attenuation. The low cytotoxicity of SNARF™-1 carboxylic acid, acetate, SE minimizes perturbation of cellular physiology, making it particularly suitable for sensitive assays, including cell proliferation, population dynamics, and cell migration studies in both in vitro and in vivo systems. Its compatibility with flow cytometry and fluorescence microscopy enables robust, quantitative, high-resolution pH and cell-tracking analyses across complex experimental models.

Spectrum

References

View all 50 references: Citation Explorer
Combined pH ratiometry and fluorescence lectin-binding analysis (pH-FLBA) for microscopy-based analyses of biofilm pH and matrix carbohydrates.
Authors: Del Rey, Yumi C and Schramm, Andreas and L Meyer, Rikke and Lund, Marie Braad and Schlafer, Sebastian
Journal: Applied and environmental microbiology (2024): e0200723
Non-Destructive Measurement of Acetic Acid and Its Distribution in a Photovoltaic Module during Damp Heat Testing Using pH-Sensitive Fluorescent Dye Sensors.
Authors: Nagasaki, Hideaki and Asaka, Takashi and Iwami, Kentaro and Umeda, Norihiro and Yamamoto, Chizuko and Hara, Yukiko and Masuda, Atsushi
Journal: Sensors (Basel, Switzerland) (2022)
Evaluation of Interfacial pH Using Surface Forces Apparatus Fluorescence Spectroscopy.
Authors: Kasuya, Motohiro and Sano, Yuka and Kawashima, Masataka and Kurihara, Kazue
Journal: Langmuir : the ACS journal of surfaces and colloids (2021): 5073-5080
Calibration and measurement of mitochondrial pH in intact adult rat cardiomyocytes.
Authors: Gao, Meng and Qin, Yuan and Li, Anqi and Liu, Hanyu and Chen, Lei and Liu, Bilin and Zhang, Ying and Gao, Yufei and Gong, Guohua
Journal: STAR protocols (2021): 100543
Control of interfacial pH in mesoporous silica nanoparticles via surface functionalization.
Authors: Singappuli-Arachchige, Dilini and Slowing, Igor I
Journal: The Journal of chemical physics (2020): 034703
Page updated on April 25, 2025

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Catalog Number21232
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Physical properties

Molecular weight

592.56

Solvent

DMSO

Spectral properties

Excitation (nm)

549

Emission (nm)

586

Storage, safety and handling

H-phraseH303, H313, H333
Hazard symbolXN
Intended useResearch Use Only (RUO)
R-phraseR20, R21, R22

Storage

Freeze (< -15 °C); Minimize light exposure
UNSPSC12171501
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