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AAT Bioquest

How is Forster distance calculated?

Posted April 30, 2021


Answer

The Förster distance represents the molecular separation at which energy transfer is 50-percent efficient. Forster distance (R0)for each donor-acceptor pair is calculated using the formula:

R?= 0.2108 [κ2 Φ?n-4J]1/6 nm.  

‘κ’ is the orientation factor between two molecules, ‘Φ?’ is the quantum yield of donor fluorescence (without acceptor), ‘n’ is the refraction index of the medium surrounding the FRET pair, and ‘J’ is the overlap integral.

Forster distance is presented in nanometers for each FRET pair.

Additional resources

Estimating the distance separating fluorescent protein FRET pairs

Screen Quest™ TR-FRET No Wash cAMP Assay Kit