| Basis of differentiation | Sanger Sequencing | PCR |
| Definition | Is the process of determining the precise nucleotide sequence in a given DNA fragment | Is the process of amplifying DNA fragments creating many copies of the DNA fragment of interest |
| Aim | To determine the correct sequences of the bases in DNA for medical, research or criminal applications | To have sufficient quantity of DNA for the next process, which is sequencing |
| Need for ddNTPs or dNTPs | Requires ddNTPs to terminate strand formation | Requires dNTPs |
| Primers | Has only one primer reading the sequence in one direction only | Has two primers facing each other |