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AAT Bioquest

What are the differences between a fluorophore and a chromophore?

Posted January 29, 2021


Answer

Fluorophores and chromophores are chemical substances that are responsible for various visible effects in compounds. A look at the salient features of fluorophores and chromophores offers a clear indication of the differences between the two.

Fluorophore

  • Is a fluorescent chemical compound capable of re-emitting light upon light excitation
  • Absorbs light energy of a certain wavelength and re-emits the energy as a longer wavelength.
  • Capable of absorbing light ranging from UV to blue light
  • Capable of emitting light in higher wavelengths
  • Capable of emitting high energy
  • The exciting and emitting wavelengths overlap
  • Responsible for the fluorescent property of a molecule
  • Emission is temperature-dependent
  • Types include intrinsic fluorophores, which occur naturally in a sample, and extrinsic fluorophores, which are manually added to a sample to change the sample’s spectral properties
  • Main applications include as a dye or staining agent, as a tracer in fluids, and as a substrate for enzymes.

Chromophore

  • Is part of a molecule that is responsible for giving the molecule its color
  • Capable of absorbing light from UV to the visible region
  • Capable of emitting light in the visible range
  • The exciting and emitting wavelengths do not overlap
  • Capable of emitting low energy
  • Responsible for giving a molecule its specific color
  • Emission is not temperature-dependent
  • Types include metal complex and conjugated π bond system chromophores
  • Main applications include food colorings, fabric dyes, and pH indicators.
Additional resources

Mechanism of Chromophore Assisted Laser Inactivation Employing Fluorescent Proteins

Förster Resonance Energy Transfer (FRET)

DABCYL succinimidyl ester [4-((4-(Dimethylamino)phenyl)azo)benzoic acid, succinimidyl ester] *CAS 146998-31-4*