The differences between PCR and qPCR are outlined in Table 1.
| Feature | PCR | qPCR |
| Use | Detects the presence or absence of specific genomic fragments | Quantifies a particular genomic fragment in a sample |
| Technique | Qualitative | Quantitative |
| Product detection | Agarose gel electrophoresis | In each amplification cycle |
| Data collection | At the end of the reaction | During the exponential phase of the reaction |
| Resolution | Poor | Very high |
| Dye | Ethidium bromide | Fluorescent dyes (e.g.Cyber Green™) |
| Efficiency | Time consuming | Less time consuming |