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AAT Bioquest

What are the differences between flow cytometry and FACS?

Posted September 1, 2022


Answer

Flow cytometry and FACS (fluorescence-activated cell sorting) are two analytical cell biology techniques that are used for detecting and profiling different cell types in a heterogeneous mixture. 

Basis of differentiationFlow cytometryFACS
DefinitionFlow cytometry is an analytical cell biology technique used to identify and study the characteristics of cells in a heterogeneous mixture.  It uses differential light scattering properties unique to each cell type in the mixture to determine the number and size of cells and nucleic acid content of the cells. FACS (fluorescence-activated cell sorting) is a specialized type of flow cytometry that facilitates the sorting out cells in a heterogeneous mixture into two or more types. It uses fluorescent-labeled antibodies to specifically identify components of different cell types 
Type of techniqueThis is an analytical cell biology technique. This is a specialized type of flow cytometry. 
Sampling method usedThe process uses the differential light-scattering properties of cells to collect the necessary data. The process uses highly specific antibodies tagged with fluorescent dyes to distinguish between cell types.  
Analysis methodA sensor is used to acquire data.An electromagnet is used to sort the sample. 
SequenceFlow cytometry follows FACS. FACS is the first step of analyzing a heterogeneous cell mixture. It is followed by flow cytometry. 
FunctionThis technique measures certain cell characteristics such as the number, size, and nucleic acid content of cells.This technique separates cells from a heterogeneous mixture into appropriate subpopulations. 
Additional resources

Flow Cytometry (FCM) Analysis and Fluorescence-Activated Cell Sorting (FACS) of Erythroid Cells

Flow Cytometry Reagents

ReadiUse™ CFSE [5-(and 6)-Carboxyfluorescein diacetate, succinimidyl ester] *CAS 150347-59-4*