In the discontinuous buffer system, different buffer ions and pH are employed in the gel and in the electrode reservoirs. Protein samples are loaded onto the stacking gel, which is a large pore, non-restrictive gel that is layered on top of a smaller-pore gel, known as the resolving gel.
A discontinuous buffer system offers two major benefits.
- The first benefit is it enables researchers to apply relatively large volumes of dilute protein samples to the gel.
- The second benefit is it provides a much greater resolution than that provided by a continuous buffer system.