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DiI perchlorate [1,1-Dioctadecyl-3,3,3,3-tetramethylindocarbocyanine perchlorate] *CAS 41085-99-8*

DiI, DiO, DiD and DiR dyes are a family of lipophilic fluorescent stains for labeling membranes and other hydrophobic structures. The fluorescence of these environment-sensitive dyes is greatly enhanced when incorporated into membranes or bound to lipophilic biomolecules such as proteins although they are weakly fluorescent in water. They have high extinction coefficients, polarity-dependent fluorescence and short excited-state lifetimes. Once applied to cells, these dyes diffuse laterally within the cellular plasma membranes, resulting in even staining of the entire cell at their optimal concentrations. The distinct fluorescence colors of DiI (orange fluorescence), DiO (green fluorescence), DiD (red fluorescence) and DiR (deep red fluorescent) provide a convenient tool for multicolor imaging and flow cytometric analysis of live cells. DiO and DiI can be used with standard FITC and TRITC filters respectively. Among them DiI and its analogs are most frequently used since they usually exhibit very low cell toxicity. In addition, DiI is widely used for determining lipoproteins such as LDL and HDL.
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Catalog Number22102
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Physical properties
Molecular weight961.32
SolventDMSO
Spectral properties
Extinction coefficient (cm -1 M -1)148000
Excitation (nm)550
Emission (nm)564
Storage, safety and handling
H-phraseH303, H313, H333
Hazard symbolXN
Intended useResearch Use Only (RUO)
R-phraseR20, R21, R22
StorageFreeze (< -15 °C); Minimize light exposure
UNSPSC12352200
CAS41085-99-8
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Common stock solution preparation

Table 1. Volume of DMSO needed to reconstitute specific mass of DiI perchlorate [1,1-Dioctadecyl-3,3,3,3-tetramethylindocarbocyanine perchlorate] *CAS 41085-99-8* to given concentration. Note that volume is only for preparing stock solution. Refer to sample experimental protocol for appropriate experimental/physiological buffers.

0.1 mg0.5 mg1 mg5 mg10 mg
1 mM104.024 µL520.118 µL1.04 mL5.201 mL10.402 mL
5 mM20.805 µL104.024 µL208.047 µL1.04 mL2.08 mL
10 mM10.402 µL52.012 µL104.024 µL520.118 µL1.04 mL

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Citations
View all 49 citations: Citation Explorer
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Journal: Veterinary Microbiology (2024): 110062
Extracellular vesicles from lung tissue drive bone marrow neutrophil recruitment in inflammation
Authors: Liu, Bowen and Jin, Yuan and Yang, Jingyi and Han, Yue and Shan, Hui and Qiu, Mantang and Zhao, Xuyang and Liu, Anhang and Jin, Yan and Yin, Yuxin
Journal: Journal of Extracellular Vesicles (2022): e12223
Novel fusion peptides deliver exosomes to modify injectable thermo-sensitive hydrogels for bone regeneration
Authors: Ma, Shiqing and Wu, Jinzhe and Hu, Han and Mu, Yuzhu and Zhang, Lei and Zhao, Yifan and Bian, Xiaowei and Jing, Wei and Wei, Pengfei and Zhao, Bo and others,
Journal: Materials Today Bio (2022): 100195
Agrobacterium tumefaciens small lipoprotein atu8019 is involved in selective outer membrane vesicle (OMV) docking to bacterial cells
Authors: Knoke, Lisa Roxanne and Abad Herrera, Sara and G{\"o}tz, Katrin and Justesen, Bo H{\o}jen and G{\"u}nther Pomorski, Thomas and Fritz, Christiane and Sch{\"a}kermann, Sina and Bandow, Julia Elisabeth and Aktas, Meriyem
Journal: Frontiers in microbiology (2020): 1228
Deformable Liposomal Hydrogel for Dermal and Transdermal Delivery of Meloxicam
Authors: Zhang, Zhang Julia and Osma{\l}ek, Tomasz and Michniak-Kohn, Bozena
Journal: International Journal of Nanomedicine (2020): 9319
References
View all 92 references: Citation Explorer
Nox2, Ca2+, and protein kinase C play a role in angiotensin II-induced free radical production in nucleus tractus solitarius
Authors: Wang G, Anrather J, Glass MJ, Tarsitano MJ, Zhou P, Frys KA, Pickel VM, Iadecola C.
Journal: Hypertension (2006): 482
Confocal laser scanning microscopy using dialkylcarbocyanine dyes for cell tracing in hard and soft biomaterials
Authors: Heinrich L, Freyria AM, Melin M, Tourneur Y, Maksoud R, Bernengo JC, Hartmann DJ.
Journal: J Biomed Mater Res B Appl Biomater. (2006)
In vivo imaging and counting of rat retinal ganglion cells using a scanning laser ophthalmoscope
Authors: Higashide T, Kawaguchi I, Ohkubo S, Takeda H, Sugiyama K.
Journal: Invest Ophthalmol Vis Sci (2006): 2943
Functional neuroanatomy of the rhinophore of Aplysia punctata
Authors: Wertz A, Rossler W, Obermayer M, Bickmeyer U.
Journal: Front Zool (2006): 6
Use of lipophilic near-infrared dye in whole-body optical imaging of hematopoietic cell homing
Authors: Kalchenko V, Shivtiel S, Malina V, Lapid K, Haramati S, Lapidot T, Brill A, Harmelin A.
Journal: J Biomed Opt (2006): 50507