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AAT Bioquest

How do I choose the right strategy for my gene editing experiment?

Posted March 21, 2024


Answer

There are several factors to consider when choosing the right strategy for gene editing. The polycistronic transfer RNA-gRNA system offers several advantages over monocistronic strategies. These advantages include higher editing efficiency, efficient use of vector space, and the flexibility to utilize cell-type-specific promoters (such as Pol II promoters instead of Pol III). However, if the procedure involves cloning and testing gRNAs individually to confirm their effectiveness, a practical approach is to start by transfecting the cell line with a mixture of individually cloned gRNA plasmids. In the event of inadequate transfection or editing efficiency, a transition to a polycistronic approach can be considered later on.

Additional resources

Multiplexed CRISPR technologies for gene editing and transcriptional regulation

Genome Editing & CRISPR

Transfectamine™ 5000 Transfection Reagent