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AAT Bioquest

What are the differences between restriction enzyme type 1, 2 and 3?"

Posted August 25, 2022


Answer
Restriction enzyme type 1Restriction enzyme type 2Restriction enzyme type 3
Type 1 restriction enzymes recognize certain DNA sequences and make cuts at random sites as far as 1000 base pairs away from the recognition siteType 2 restriction enzymes recognize and cut certain DNA sequences that are all within the recognition siteRecognition enzyme type 3 recognizes specific sequences and cut at a different location that is approximately within 25 base pairs of the recognition site
Is a multimeter with 3 subunitsIs a homodimerIs a heterodimer
Restriction and methylation are exclusive reactions Restriction and methylation are separate reactionsRestriction and methylation reactions happen simultaneously
Cleavage happens prior to DNA translocationNo translocation occursNo translocation occurs
Has both restriction and methylase mechanismsHas separate restriction and methylase activitiesHas both restriction and methylase activities
Has a bipartite asymmetric restriction recognition siteHas a 4-6 base pair palindromic sequenceHas a 5-7 base pair asymmetric restriction recognition site
ATP, MG2+ and S-adenosyl is required for restrictionMG2+ is required for restrictionATP and Mg2+ is required for restriction
Additional resources

Restriction Enzymes

Gelite™ Safe DNA Gel Stain *10,000X Water Solution*

Gel Electrophoresis