Basis of differentiation | Southern Blotting | Northern blotting | Western blotting |
Target molecule | DNA | RNA | Proteins |
Sample preparation | DNA extraction and digestion | RNA extraction and separation | Protein extraction and denaturation |
Membrane type | Nylon or nitrocellulose membranes | Nylon or nitrocellulose membranes | Nitrocellulose membranes |
Probe type | Single-stranded DNA or RNA is used as a probe | cDNA or RNA probes are used with radioactive or non-radioactive labels | Antibodies (primary and secondary) |
Blotting technique | Capillary transfer blotting technique | Capillary transfer blotting technique | Electric transfer blotting technique |
Detection method | Chemiluminescence, X-Ray film | Chemiluminescence, X-Ray film | CCD camera, Film or LED imaging system |