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What are the differences between Southern blotting and other blotting techniques?
Posted May 2, 2024

Answer

Basis of differentiation

Southern Blotting

Northern blotting

Western blotting

Target molecule

DNA 

RNA 

Proteins

Sample preparation

DNA extraction and digestion

RNA extraction and separation

Protein extraction and denaturation

Membrane type

Nylon or nitrocellulose membranes

Nylon or nitrocellulose membranes

Nitrocellulose membranes

Probe type

Single-stranded DNA or RNA is used as a probe

cDNA or RNA probes are used with radioactive or non-radioactive labels

Antibodies (primary and secondary)

Blotting technique

Capillary transfer blotting technique

Capillary transfer blotting technique

Electric transfer blotting technique

Detection method

Chemiluminescence, X-Ray film

Chemiluminescence, X-Ray film

CCD camera, Film or LED imaging system