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AAT Bioquest

What is difference between CRISPR interference and CRISPR activation?

Posted July 22, 2020


Answer

CRISPR interference (CRISPRi) is a genetic perturbation technique that inhibits gene expression by targeting a nuclease dead version of Cas9 (dCas9) to a region near the transcription start site (TSS). Thereby, the cell’s transcription machinery is prevented from accessing the TSS, resulting in the inhibition of gene expression.

CRISPR activation (CRISPRa) is also a type of CRISPR tool that employs the modified versions of dCas9. In contrast to CRISPRi, transcriptional activators are added on dCas9 or the guide RNAs, aiming to increase, rather than inhibit, expression of genes of interest.

Additional resources

Helixyte™ Green *10,000X Aqueous PCR Solution*

6-ROX glycine *25 uM fluorescence reference solution for PCR reactions*

Doudna, J. A., & Charpentier, E. (2014). The new frontier of genome engineering with CRISPR-Cas9. Science, 346(6213), 1258096.

Ran, F. A., Hsu, P. D., Wright, J., Agarwala, V., Scott, D. A., & Zhang, F. (2013). Genome engineering using the CRISPR-Cas9 system. Nature protocols, 8(11), 2281.

Hannon, G. J. (2002). RNA interference. nature, 418(6894), 244-251.