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AAT Bioquest

What is the difference between CRISPRi and RNAi?

Posted July 22, 2020


Answer

Both CRISPR interference (CRISPRi) and RNA interference (RNAi) are common techniques for gene silencing. The major difference between these two methods is that CRISPRi represses genes at the DNA level, whereas RNAi controls genes at the mRNA level. In other words, CRISPRi regulates gene expression primarily by inhibiting gene transcription, while RNAi destroys RNA transcripts. Comparing to RNAi, CRISPRi is associated with higher efficiency, greater versatility and fewer off-target effect.

Additional resources

Helixyte™ Green *10,000X Aqueous PCR Solution*

6-ROX glycine *25 uM fluorescence reference solution for PCR reactions*

Doudna, J. A., & Charpentier, E. (2014). The new frontier of genome engineering with CRISPR-Cas9. Science, 346(6213), 1258096.

Ran, F. A., Hsu, P. D., Wright, J., Agarwala, V., Scott, D. A., & Zhang, F. (2013). Genome engineering using the CRISPR-Cas9 system. Nature protocols, 8(11), 2281.

Hannon, G. J. (2002). RNA interference. nature, 418(6894), 244-251.